LOINC Home

{component}   LP432695-7

Laboratory   LP29693-6

Lab terms not yet categorized   LP248770-2

Genomic reference sequence [ID]   48013-7

LOINC Code


LOINC code48013-7
nameGenomic reference sequence [ID]
descriptionThis field carries the ID for the genomic reference sequence. The genomic reference sequence is a contiguous stretch of chromosome DNA that spans all of the exons of the gene and includes transcribed and non transcribed stretches. For this ID use either the NCBI genomic nucleotide RefSeq IDs with their version number (see: NCBI.NLM.NIH.Gov/RefSeq) or use the LRG identifiers, without transcript (t or p) extensions -- when they become available. (See- Report sponsored by GEN2PHEN at the European Bioinformatics Institute at Hinxton UK April 24-25, 2008). The NCI RefSeq genomic IDs are distinguished by a prefix of"NG" for genes from the nuclear chromosomes and prefix of "NC" for genes from mitochondria. The LRG Identifiers have a prefix of "LRG_" Mitochondrial genes are not in the scope of LRG
statusACTIVE

Fully-Specified Name

componentGenomic reference sequence identifier
propertyID  =  Identifier
timePt  =  Point in time:  To identify measures at a point in time. This is a synonym for “spot” or “random” as applied to urine measurements.
systemBld/Tiss
    Bld  =  Whole blood
    Tiss  =  Tissue, unspecified
scaleNom  =  Nominal:  Nominal or categorical responses that do not have a natural ordering. (e.g., names of bacteria, reported as answers, categories of appearance that do not have a natural ordering, such as, yellow, clear, bloody.
method

Additional Names

short nameGenomic reference sequence ID

Basic Attributes

classHL7.GENETICS
type1  Laboratory
order vs. observationObservation

Associated Observations

LOINC codes that represent optional associated observation(s) for a clinical observation or laboratory test. A LOINC term may represent a single associated observation or panel containing several associated observations.

Member of these Panels

81250-3Discrete genetic variant panel
81250-3Discrete genetic variant panel
81250-3Discrete genetic variant panel
77313-5DNA analysis discrete sequence variation basic associated observations panel - Blood or Tissue by Molecular genetics method
55208-3DNA analysis discrete sequence variation panel
53042-8DNA marker assessed panel
53044-4DNA marker identified panel
53044-4DNA marker identified panel
53044-4DNA marker identified panel
53044-4DNA marker identified panel
53041-0DNA region of interest panel
78046-0Pharmacogenomic analysis basic associated observations panel - Blood or Tissue
48017-8Sequencing methodology panel - Blood or Tissue by Molecular genetics method

History/Usage

first released
last updated2.58
last change typeMIN  - change to field other than name

Related Names

Blood
Genetic
Genetics
Genomic
Heredity
Heritable
HL7.GENETICS
Ident
Identifier
Inherited
MOLPATH.GENERAL
 Nominal
Point in time
Random
Ref Sequence
Reference sequence ID
RefSeq
Tissue
Tissue, unspecified
WB
Whole blood
Whole blood or Tissue

Copyright © 2023 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2023, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.

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